BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002H03LP1|AL425030
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig143 858 0.0
>3x_Contig143
Length = 1412
Score = 858 bits (431), Expect = 0.0
Identities = 436/439 (99%)
Strand = Plus / Minus
Query: 1 gatcagagtttaacaaagctaccgataacataatgctgaagttttttttacgagcagcac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 439 gatcagagtttaacaaagctaccgataccataatgctgaagttttttttacgagcagcac 380
Query: 61 tccctgctagcggtattaggacgtcgacgattaaccgtaccagattttatcgaaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tccctgctagcggtattaggacgtcgacgattaaccgtaccagattttatcgaaccacca 320
Query: 121 gacttttaagaaacaacggtacaggtaataagtttgacctttctaagcttacgagagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gacttttaagaaacaacggtacaggtaataagtttgacctttctaagcttacgagagaag 260
Query: 181 agattaaagaaattcgtgattatmagattagtgctgcccgcaggtacaaggaccgtacgg 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 259 agattaaagaaattcgtgattataagattagtgctgcccgcaggtacaaggaccgtacgg 200
Query: 241 ttgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttgcgttttatttcactagtattgctgttttatttctgggacttgcgtacgctgcggtgc 140
Query: 301 cattatacagagccatctgtgctagaactgggtacggtggtattccaatcacagacaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cattatacagagccatctgtgctagaactgggtacggtggtattccaatcacagacaagc 80
Query: 361 gtaagtttaccgatgataagttgatacctgttgattctmataagagaataagaatttcgt 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 79 gtaagtttaccgatgataagttgatacctgttgattctaataagagaataagaatttcgt 20
Query: 421 ttaccagtgaagtgtcaca 439
|||||||||||||||||||
Sbjct: 19 ttaccagtgaagtgtcaca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7485
Number of Sequences: 1807
Number of extensions: 7485
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)